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A tool to compress genomic data using Blocked GNU Zip Format.
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README.md

pyBGZ

A tool to compress genomic data in FastQ format using Blocked GNU Zip.

Table of Contents

Installation

Download pyBGZ package and install it using pip.

pip install pybgz-1.0.5-py3-none-any.whl

Installation

Usage

pybgz INPUT_FILE

Use

Arguments: input_file PATH [required]

Note

pyBGZ will remove any information at field 3 (third line) which, when present, are repeated informations from field 1 (first line). This helps reducing the size of the compressed file. No sequence or quality information will be modified.

License

pyBGZ is distributed under the terms of the LGPL-3.0-or-later license.